Pseudomonas protegens Pf-5, PFL_0854 (ampE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0854
Name
ampE
Replicon chromosome
Genomic location 985930 - 986766 (+ strand)

Cross-References

RefSeq YP_257986.1
GI 70734346
Entrez 3481434
INSDC AAY96251.1
NCBI Locus Tag PFL_0854
UniParc UPI000054CE9E
UniProtKB Acc Q4KIE7
UniProtKB ID Q4KIE7_PSEF5
UniRef100 UniRef100_Q4KIE7
UniRef50 UniRef50_Q02GS0
UniRef90 UniRef90_Q4KIE7

Product

Feature Type CDS
Coding Frame 1
Product Name
inner membrane protein AmpE
Synonyms
Evidence for Translation
Charge (pH 7) -2.11
Kyte-Doolittle Hydrophobicity Value 0.630
Molecular Weight (kDa) 31.0
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 47 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004101 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0854
Search term: ampE

Human Homologs

References

No references are associated with this feature.