Pseudomonas protegens Pf-5, PFL_0889

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0889
Name
Replicon chromosome
Genomic location 1033091 - 1034032 (+ strand)

Cross-References

RefSeq YP_258020.1
GI 70728271
Entrez 3475476
INSDC AAY90176.1
NCBI Locus Tag PFL_0889
UniParc UPI000054CEC0
UniProtKB Acc Q4KIB3
UniProtKB ID Q4KIB3_PSEF5
UniRef100 UniRef100_Q4KIB3
UniRef50 UniRef50_G8Q9A5
UniRef90 UniRef90_Q4KIB3

Product

Feature Type CDS
Coding Frame 1
Product Name
AEC family transporter
Synonyms
Evidence for Translation
Charge (pH 7) 2.82
Kyte-Doolittle Hydrophobicity Value 0.970
Molecular Weight (kDa) 33.4
Isoelectric Point (pI) 8.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 230 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015224 (212 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0889

Human Homologs

References

No references are associated with this feature.