Pseudomonas protegens Pf-5, PFL_0935 (cysD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0935
Name
cysD
Replicon chromosome
Genomic location 1077361 - 1078278 (+ strand)

Cross-References

RefSeq YP_258066.1
GI 70728317
EC Number 2.7.7.4
Entrez 3475463
INSDC AAY90222.1
NCBI Locus Tag PFL_0935
UniParc UPI000054CEED
UniProtKB Acc Q4KI67
UniProtKB ID CYSD_PSEF5
UniRef100 UniRef100_Q4KI67
UniRef50 UniRef50_P28603
UniRef90 UniRef90_Q87WW0

Product

Feature Type CDS
Coding Frame 1
Product Name
sulfate adenylyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -1.37
Kyte-Doolittle Hydrophobicity Value -0.542
Molecular Weight (kDa) 35.3
Isoelectric Point (pI) 6.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1ZUN TRANSFERASE 05/31/05 Crystal Structure of a GTP-Regulated ATP Sulfurylase Heterodimer from Pseudomonas syringae Pseudomonas syringae; Pseudomonas syringae pv. tomato str. DC3000 2.7 X-RAY DIFFRACTION 96.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 367 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004032 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0935
Search term: cysD

Human Homologs

References

No references are associated with this feature.