Pseudomonas protegens Pf-5, PFL_0976

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0976
Name
Replicon chromosome
Genomic location 1117435 - 1117935 (+ strand)

Cross-References

RefSeq YP_258107.1
GI 70728358
Entrez 3476750
INSDC AAY90263.1
NCBI Locus Tag PFL_0976
UniParc UPI000054CF16
UniProtKB Acc Q4KI26
UniProtKB ID Q4KI26_PSEF5
UniRef100 UniRef100_Q4KI26
UniRef50 UniRef50_Q4KI26
UniRef90 UniRef90_Q4KI26

Product

Feature Type CDS
Coding Frame 1
Product Name
PsiE family protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.12
Kyte-Doolittle Hydrophobicity Value 0.524
Molecular Weight (kDa) 18.6
Isoelectric Point (pI) 6.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 56 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002225 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0976

Human Homologs

References

No references are associated with this feature.