Pseudomonas protegens Pf-5, PFL_1079 (nagF)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_1079
Name	nagF
Replicon	chromosome
Genomic location	1234035 - 1236554 (- strand)

Cross-References

RefSeq	YP_258210.1
GI	70728461
EC Number	2.7.3.9
Entrez	3477451
INSDC	AAY90366.1
NCBI Locus Tag	PFL_1079
UniParc	UPI000054CF7D
UniProtKB Acc	Q4KHS3
UniProtKB ID	Q4KHS3_PSEF5
UniRef100	UniRef100_Q4KHS3
UniRef50	UniRef50_A0A038CDV4
UniRef90	UniRef90_Q4KHS3

Product

Feature Type	CDS
Coding Frame	1
Product Name	PTS system N-acetylglucosamine-specific transporter subunit IIA
Synonyms
Evidence for Translation
Charge (pH 7)	-21.88
Kyte-Doolittle Hydrophobicity Value	-0.060
Molecular Weight (kDa)	89394.0
Isoelectric Point (pI)	5.45

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 617 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001922 (403 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_1079 Search term: nagF Search term: PTS system N-acetylglucosamine-specific transporter subunit IIA

Human Homologs

References