Pseudomonas protegens Pf-5, PFL_1081 (nagA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1081
Name
nagA
Replicon chromosome
Genomic location 1237584 - 1238690 (- strand)

Cross-References

RefSeq YP_258212.1
GI 70728463
EC Number 3.5.1.25
Entrez 3477453
INSDC AAY90368.1
NCBI Locus Tag PFL_1081
UniParc UPI000054CF7F
UniProtKB Acc Q4KHS1
UniProtKB ID Q4KHS1_PSEF5
UniRef100 UniRef100_Q4KHS1
UniRef50 UniRef50_Q1I5M0
UniRef90 UniRef90_Q4KHS1

Product

Feature Type CDS
Coding Frame 1
Product Name
N-acetylglucosamine-6-phosphate deacetylase
Synonyms
Evidence for Translation
Charge (pH 7) -4.58
Kyte-Doolittle Hydrophobicity Value -0.036
Molecular Weight (kDa) 39286.5
Isoelectric Point (pI) 6.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 341 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001924 (386 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1081
Search term: nagA

Human Homologs

Ensembl 110, assembly GRCh38.p14
amidohydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24262]
E-value: 9.1e-43
Percent Identity: 34.0

References

No references are associated with this feature.