Pseudomonas protegens Pf-5, PFL_1090

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1090
Name
Replicon chromosome
Genomic location 1244321 - 1245637 (- strand)

Cross-References

RefSeq YP_258221.2
GI 346642762
Entrez 3477462
INSDC AAY90377.2
NCBI Locus Tag PFL_1090
UniParc UPI000219FF5A
UniProtKB Acc Q4KHR2
UniProtKB ID Q4KHR2_PSEF5
UniRef100 UniRef100_Q4KHR2
UniRef50 UniRef50_Q02RM2
UniRef90 UniRef90_I7B0Y3

Product

Feature Type CDS
Coding Frame 1
Product Name
major facilitator family transporter
Synonyms
Evidence for Translation
Charge (pH 7) 5.52
Kyte-Doolittle Hydrophobicity Value 0.755
Molecular Weight (kDa) 46275.9
Isoelectric Point (pI) 8.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 316 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001933 (496 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1090

Human Homologs

References

No references are associated with this feature.