Pseudomonas protegens Pf-5, PFL_1183 (rseP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1183
Name
rseP
Replicon chromosome
Genomic location 1354032 - 1355384 (+ strand)

Cross-References

RefSeq YP_258314.1
GI 70728565
EC Number 3.4.24.-
Entrez 3477205
INSDC AAY90470.1
NCBI Locus Tag PFL_1183
UniParc UPI000054CFE5
UniProtKB Acc Q4KHG9
UniProtKB ID Q4KHG9_PSEF5
UniRef100 UniRef100_Q4KHG9
UniRef50 UniRef50_Q4KHG9
UniRef90 UniRef90_Q4KHG9

Product

Feature Type CDS
Coding Frame 1
Product Name
RIP metalloprotease RseP
Synonyms
Evidence for Translation
Charge (pH 7) 0.43
Kyte-Doolittle Hydrophobicity Value 0.242
Molecular Weight (kDa) 48.6
Isoelectric Point (pI) 7.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 587 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002025 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1183
Search term: rseP

Human Homologs

References

No references are associated with this feature.