Pseudomonas protegens Pf-5, PFL_1233

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1233
Name
Replicon chromosome
Genomic location 1405414 - 1406532 (- strand)

Cross-References

RefSeq YP_258364.1
GI 70728615
Entrez 3477410
INSDC AAY90520.1
NCBI Locus Tag PFL_1233
UniParc UPI000054D017
UniProtKB Acc Q4KHB9
UniProtKB ID Q4KHB9_PSEF5
UniRef100 UniRef100_Q4KHB9
UniRef50 UniRef50_G8QC58
UniRef90 UniRef90_Q4KHB9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.93
Kyte-Doolittle Hydrophobicity Value -0.268
Molecular Weight (kDa) 42010.3
Isoelectric Point (pI) 6.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 369 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002059 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1233

Human Homologs

References

No references are associated with this feature.