Pseudomonas protegens Pf-5, PFL_1262

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1262
Name
Replicon chromosome
Genomic location 1433562 - 1433774 (+ strand)

Cross-References

RefSeq YP_258391.1
GI 70728642
Entrez 3475690
INSDC AAY90547.1
NCBI Locus Tag PFL_1262
UniParc UPI000054D031
UniProtKB Acc Q4KH92
UniProtKB ID Q4KH92_PSEF5
UniRef100 UniRef100_Q4KH92
UniRef50 UniRef50_Q4ZPL0
UniRef90 UniRef90_Q4KH92

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.77
Kyte-Doolittle Hydrophobicity Value -0.337
Molecular Weight (kDa) 7.3
Isoelectric Point (pI) 3.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015264 (157 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1262

Human Homologs

References

No references are associated with this feature.