Pseudomonas protegens Pf-5, PFL_1289

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1289
Name
Replicon chromosome
Genomic location 1460349 - 1461026 (- strand)

Cross-References

RefSeq YP_258418.2
GI 346642779
Entrez 3478167
INSDC AAY90574.2
NCBI Locus Tag PFL_1289
UniParc UPI000219FECF
UniProtKB Acc Q4KH65
UniProtKB ID Q4KH65_PSEF5
UniRef100 UniRef100_Q4KH65
UniRef50 UniRef50_Q88NS0
UniRef90 UniRef90_Q4KH65

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 2.29
Kyte-Doolittle Hydrophobicity Value -0.353
Molecular Weight (kDa) 24613.7
Isoelectric Point (pI) 8.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 3 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015278 (110 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1289
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.