Pseudomonas protegens Pf-5, PFL_1322

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1322
Name
Replicon chromosome
Genomic location 1495951 - 1497246 (+ strand)

Cross-References

RefSeq YP_258451.2
GI 346642786
Entrez 3478141
INSDC AAY90607.2
NCBI Locus Tag PFL_1322
UniParc UPI000219FEDF
UniProtKB Acc Q4KH32
UniProtKB ID Q4KH32_PSEF5
UniRef100 UniRef100_Q4KH32
UniRef50 UniRef50_P0AEX3
UniRef90 UniRef90_C3KAN7

Product

Feature Type CDS
Coding Frame 1
Product Name
metabolite:H+ symporter (MHS) family MFS transporter protein
Synonyms
Evidence for Translation
Charge (pH 7) 10.33
Kyte-Doolittle Hydrophobicity Value 0.610
Molecular Weight (kDa) 47296.2
Isoelectric Point (pI) 9.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 330 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000228 (485 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1322

Human Homologs

References

No references are associated with this feature.