Pseudomonas protegens Pf-5, PFL_1323 (pcaB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1323
Name
pcaB
Replicon chromosome
Genomic location 1497295 - 1498659 (+ strand)

Cross-References

RefSeq YP_258452.1
GI 70728703
EC Number 5.5.1.2
Entrez 3478142
INSDC AAY90608.1
NCBI Locus Tag PFL_1323
UniParc UPI000054D06E
UniProtKB Acc Q4KH31
UniProtKB ID Q4KH31_PSEF5
UniRef100 UniRef100_Q4KH31
UniRef50 UniRef50_A9AQZ0
UniRef90 UniRef90_Q4KH31

Product

Feature Type CDS
Coding Frame 1
Product Name
3-carboxy-cis,cis-muconate cycloisomerase
Synonyms
Evidence for Translation
Charge (pH 7) -6.04
Kyte-Doolittle Hydrophobicity Value 0.099
Molecular Weight (kDa) 48727.6
Isoelectric Point (pI) 6.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 647 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000229 (504 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1323
Search term: pcaB

Human Homologs

References

No references are associated with this feature.