Pseudomonas protegens Pf-5, PFL_1439

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_1439
Name
Replicon	chromosome
Genomic location	1618707 - 1619693 (- strand)

Cross-References

RefSeq	YP_258567.1
GI	70728818
Entrez	3475787
INSDC	AAY90723.1
NCBI Locus Tag	PFL_1439
UniParc	UPI000054D0E1
UniProtKB Acc	Q4KGR6
UniProtKB ID	Q4KGR6_PSEF5
UniRef100	UniRef100_Q4KGR6
UniRef50	UniRef50_F2EPT1
UniRef90	UniRef90_G8PYD7

Product

Feature Type	CDS
Coding Frame	1
Product Name	periplasmic tricarboxylate-binding receptor, TTT family
Synonyms
Evidence for Translation
Charge (pH 7)	-2.61
Kyte-Doolittle Hydrophobicity Value	-0.018
Molecular Weight (kDa)	35.2
Isoelectric Point (pI)	5.50

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 180 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000728 (529 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_1439 Search term: periplasmic tricarboxylate-binding receptor, TTT family

Human Homologs

References