Pseudomonas protegens Pf-5, PFL_1452

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1452
Name
Replicon chromosome
Genomic location 1632039 - 1633472 (- strand)

Cross-References

RefSeq YP_258580.1
GI 70728831
EC Number 3.4.24.-
Entrez 3475742
INSDC AAY90736.1
NCBI Locus Tag PFL_1452
UniParc UPI000054D0EC
UniProtKB Acc Q4KGQ3
UniProtKB ID Q4KGQ3_PSEF5
UniRef100 UniRef100_Q4KGQ3
UniRef50 UniRef50_Q4KGQ3
UniRef90 UniRef90_Q4KGQ3

Product

Feature Type CDS
Coding Frame 1
Product Name
M48 family peptidase
Synonyms
Evidence for Translation
Charge (pH 7) 0.19
Kyte-Doolittle Hydrophobicity Value -0.407
Molecular Weight (kDa) 53.3
Isoelectric Point (pI) 7.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 347 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000968 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1452

Human Homologs

References

No references are associated with this feature.