Pseudomonas protegens Pf-5, PFL_1453

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1453
Name
Replicon chromosome
Genomic location 1633705 - 1633944 (+ strand)

Cross-References

RefSeq YP_258581.1
GI 70728832
Entrez 3475743
INSDC AAY90737.1
NCBI Locus Tag PFL_1453
UniParc UPI000054D0ED
UniProtKB Acc Q4KGQ2
UniProtKB ID Q4KGQ2_PSEF5
UniRef100 UniRef100_Q4KGQ2
UniRef50 UniRef50_H8WD67
UniRef90 UniRef90_A0A0B7D682

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.43
Kyte-Doolittle Hydrophobicity Value -0.142
Molecular Weight (kDa) 8.7
Isoelectric Point (pI) 7.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 286 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000969 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1453

Human Homologs

References

No references are associated with this feature.