Pseudomonas protegens Pf-5, PFL_1497

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_1497
Name
Replicon	chromosome
Genomic location	1683018 - 1683950 (+ strand)

Cross-References

RefSeq	YP_258624.2
GI	346642803
Entrez	3475417
INSDC	AAY90780.2
NCBI Locus Tag	PFL_1497
UniParc	UPI000219FF28
UniProtKB Acc	Q4KGK9
UniProtKB ID	Q4KGK9_PSEF5
UniRef100	UniRef100_Q4KGK9
UniRef50	UniRef50_D7HXF1
UniRef90	UniRef90_Q4KGK9

Product

Feature Type	CDS
Coding Frame	1
Product Name	D-isomer specific 2-hydroxyacid dehydrogenase family protein
Synonyms
Evidence for Translation
Charge (pH 7)	-1.90
Kyte-Doolittle Hydrophobicity Value	0.073
Molecular Weight (kDa)	34.1
Isoelectric Point (pI)	6.60

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 621 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001240 (513 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_1497 Search term: D-isomer specific 2-hydroxyacid dehydrogenase family protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000515211 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 5.2e-07 Percent Identity: 30.6
Ensembl 110, assembly GRCh38.p14	ENSP00000515212 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 5.2e-07 Percent Identity: 30.6
Ensembl 110, assembly GRCh38.p14	ENSP00000290921 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 5.2e-07 Percent Identity: 30.6
Ensembl 110, assembly GRCh38.p14	ENSP00000422148 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 5.2e-07 Percent Identity: 30.6
Ensembl 110, assembly GRCh38.p14	ENSP00000515213 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 5.2e-07 Percent Identity: 30.6
Ensembl 110, assembly GRCh38.p14	ENSP00000515195 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 5.2e-07 Percent Identity: 30.6
Ensembl 110, assembly GRCh38.p14	ENSP00000372411 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 5.2e-07 Percent Identity: 30.6

References