Pseudomonas protegens Pf-5, PFL_1520

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1520
Name
Replicon chromosome
Genomic location 1703639 - 1704577 (+ strand)

Cross-References

RefSeq YP_258647.1
GI 70728898
EC Number 1.14.11.16
Entrez 3475887
INSDC AAY90803.1
NCBI Locus Tag PFL_1520
UniParc UPI000054D12F
UniProtKB Acc Q4KGI6
UniProtKB ID Q4KGI6_PSEF5
UniRef100 UniRef100_Q4KGI6
UniRef50 UniRef50_Q4KGI6
UniRef90 UniRef90_Q4KGI6

Product

Feature Type CDS
Coding Frame 1
Product Name
aspartyl/asparaginyl beta-hydroxylase
Synonyms
Evidence for Translation
Charge (pH 7) 12.83
Kyte-Doolittle Hydrophobicity Value -0.152
Molecular Weight (kDa) 35.9
Isoelectric Point (pI) 9.94

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 84 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000902 (489 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1520

Human Homologs

References

No references are associated with this feature.