Pseudomonas protegens Pf-5, PFL_1540 (aqpZ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1540
Name
aqpZ
Replicon chromosome
Genomic location 1728965 - 1729663 (- strand)

Cross-References

RefSeq YP_258667.1
GI 70728918
Entrez 3476706
INSDC AAY90823.1
NCBI Locus Tag PFL_1540
UniParc UPI000054D143
UniProtKB Acc Q4KGG6
UniProtKB ID Q4KGG6_PSEF5
UniRef100 UniRef100_Q4KGG6
UniRef50 UniRef50_Q2YR68
UniRef90 UniRef90_I4L8J5

Product

Feature Type CDS
Coding Frame 1
Product Name
aquaporin Z
Synonyms
Evidence for Translation
Charge (pH 7) 3.85
Kyte-Doolittle Hydrophobicity Value 1.004
Molecular Weight (kDa) 23.7
Isoelectric Point (pI) 8.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 342 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001650 (438 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1540
Search term: aqpZ
Search term: aquaporin Z

Human Homologs

Ensembl 110, assembly GRCh38.p14
aquaporin 5 [Source:HGNC Symbol;Acc:HGNC:638]
E-value: 2.3e-28
Percent Identity: 35.4

References

No references are associated with this feature.