Pseudomonas protegens Pf-5, PFL_1551

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1551
Name
Replicon chromosome
Genomic location 1739932 - 1741674 (+ strand)

Cross-References

RefSeq YP_258678.1
GI 70728929
Entrez 3476659
INSDC AAY90834.1
NCBI Locus Tag PFL_1551
UniParc UPI000054D14E
UniProtKB Acc Q4KGF5
UniProtKB ID Q4KGF5_PSEF5
UniRef100 UniRef100_Q4KGF5
UniRef50 UniRef50_Q4KGF5
UniRef90 UniRef90_Q4KGF5

Product

Feature Type CDS
Coding Frame 1
Product Name
ShlB family hemolysin secretion/activation protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.03
Kyte-Doolittle Hydrophobicity Value -0.523
Molecular Weight (kDa) 64760.9
Isoelectric Point (pI) 7.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 154 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019914 (27 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1551

Human Homologs

References

No references are associated with this feature.