Pseudomonas protegens Pf-5, PFL_1643

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1643
Name
Replicon chromosome
Genomic location 1846210 - 1846515 (+ strand)

Cross-References

RefSeq YP_258769.1
GI 70729035
Entrez 3477227
INSDC AAY90940.1
NCBI Locus Tag PFL_1643
UniParc UPI000054D1A9
UniProtKB Acc Q4KG64
UniProtKB ID Q4KG64_PSEF5
UniRef100 UniRef100_Q4KG64
UniRef50 UniRef50_G4T0F3
UniRef90 UniRef90_Q4KG64

Product

Feature Type CDS
Coding Frame 1
Product Name
anti-anti-sigma factor
Synonyms
Evidence for Translation
Charge (pH 7) -2.53
Kyte-Doolittle Hydrophobicity Value -0.285
Molecular Weight (kDa) 11.4
Isoelectric Point (pI) 5.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 73 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002281 (518 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1643

Human Homologs

References

No references are associated with this feature.