Pseudomonas protegens Pf-5, PFL_1678

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1678
Name
Replicon chromosome
Genomic location 1881067 - 1881396 (- strand)

Cross-References

RefSeq YP_258804.1
GI 70729068
Entrez 3477532
INSDC AAY90973.1
NCBI Locus Tag PFL_1678
UniParc UPI000054D1CB
UniProtKB Acc Q4KG29
UniProtKB ID Q4KG29_PSEF5
UniRef100 UniRef100_Q4KG29
UniRef50 UniRef50_G8Q0Q5
UniRef90 UniRef90_Q4KG29

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.53
Kyte-Doolittle Hydrophobicity Value -0.526
Molecular Weight (kDa) 12.2
Isoelectric Point (pI) 4.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 285 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001388 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1678

Human Homologs

References

No references are associated with this feature.