Pseudomonas protegens Pf-5, PFL_1731

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1731
Name
Replicon chromosome
Genomic location 1937189 - 1938061 (- strand)

Cross-References

RefSeq YP_258857.1
GI 70729121
Entrez 3479051
INSDC AAY91026.1
NCBI Locus Tag PFL_1731
UniParc UPI000054D200
UniProtKB Acc Q4KFX6
UniProtKB ID Q4KFX6_PSEF5
UniRef100 UniRef100_Q4KFX6
UniRef50 UniRef50_A0A0B7D5M9
UniRef90 UniRef90_Q4KFX6

Product

Feature Type CDS
Coding Frame 1
Product Name
pirin
Synonyms
Evidence for Translation
Charge (pH 7) -8.20
Kyte-Doolittle Hydrophobicity Value -0.152
Molecular Weight (kDa) 31552.6
Isoelectric Point (pI) 5.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 384 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019936 (117 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1731
Search term: pirin

Human Homologs

References

No references are associated with this feature.