Pseudomonas protegens Pf-5, PFL_1795 (fabD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1795
Name
fabD
Replicon chromosome
Genomic location 1997792 - 1998730 (+ strand)

Cross-References

RefSeq YP_258915.1
GI 70729179
EC Number 2.3.1.39
Entrez 3477565
INSDC AAY91084.1
NCBI Locus Tag PFL_1795
UniParc UPI000054D23A
UniProtKB Acc Q4KFR8
UniProtKB ID Q4KFR8_PSEF5
UniRef100 UniRef100_Q4KFR8
UniRef50 UniRef50_Q4KFR8
UniRef90 UniRef90_Q4KFR8

Product

Feature Type CDS
Coding Frame 1
Product Name
ACP S-malonyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -8.67
Kyte-Doolittle Hydrophobicity Value 0.192
Molecular Weight (kDa) 32.3
Isoelectric Point (pI) 4.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 572 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002614 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1795
Search term: fabD

Human Homologs

References

No references are associated with this feature.