Pseudomonas protegens Pf-5, PFL_1862 (prpC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1862
Name
prpC
Replicon chromosome
Genomic location 2067191 - 2068318 (+ strand)

Cross-References

RefSeq YP_258981.1
GI 70729245
EC Number 2.3.3.5
Entrez 3479038
INSDC AAY91150.1
NCBI Locus Tag PFL_1862
UniParc UPI000054D27B
UniProtKB Acc Q4KFK2
UniProtKB ID Q4KFK2_PSEF5
UniRef100 UniRef100_Q4KFK2
UniRef50 UniRef50_Q56063
UniRef90 UniRef90_Q4KFK2

Product

Feature Type CDS
Coding Frame 1
Product Name
methylcitrate synthase
Synonyms
Evidence for Translation
Charge (pH 7) -2.05
Kyte-Doolittle Hydrophobicity Value -0.192
Molecular Weight (kDa) 41.9
Isoelectric Point (pI) 6.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 551 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000768 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1862
Search term: prpC

Human Homologs

References

No references are associated with this feature.