Pseudomonas protegens Pf-5, PFL_1956 (citA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1956
Name
citA
Replicon chromosome
Genomic location 2187836 - 2189134 (- strand)

Cross-References

RefSeq YP_259075.2
GI 346642854
Entrez 3478076
INSDC AAY91243.2
NCBI Locus Tag PFL_1956
UniParc UPI000219FF55
UniProtKB Acc Q4KFA8
UniProtKB ID Q4KFA8_PSEF5
UniRef100 UniRef100_Q4KFA8
UniRef50 UniRef50_G8PYX3
UniRef90 UniRef90_G8PYX3

Product

Feature Type CDS
Coding Frame 1
Product Name
citrate-proton symporter
Synonyms
Evidence for Translation
Charge (pH 7) 8.55
Kyte-Doolittle Hydrophobicity Value 0.710
Molecular Weight (kDa) 46.3
Isoelectric Point (pI) 9.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 306 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003937 (894 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1956
Search term: citA

Human Homologs

References

No references are associated with this feature.