Pseudomonas protegens Pf-5, PFL_2116 (pheT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2116
Name
pheT
Replicon chromosome
Genomic location 2335186 - 2337564 (+ strand)

Cross-References

RefSeq YP_259224.1
GI 70729486
EC Number 6.1.1.20
Entrez 3478928
INSDC AAY91391.1
NCBI Locus Tag PFL_2116
UniParc UPI000054D369
UniProtKB Acc Q4KEV9
UniProtKB ID SYFB_PSEF5
UniRef100 UniRef100_Q4KEV9
UniRef50 UniRef50_P07395
UniRef90 UniRef90_Q4KEV9

Product

Feature Type CDS
Coding Frame 1
Product Name
phenylalanyl-tRNA synthetase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -22.26
Kyte-Doolittle Hydrophobicity Value -0.109
Molecular Weight (kDa) 86705.2
Isoelectric Point (pI) 5.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 663 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002832 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2116
Search term: pheT

Human Homologs

Ensembl 110, assembly GRCh38.p14
phenylalanyl-tRNA synthetase subunit beta [Source:HGNC Symbol;Acc:HGNC:17800]
E-value: 1.6e-15
Percent Identity: 23.2

References

No references are associated with this feature.