Pseudomonas protegens Pf-5, PFL_2340 (puuD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2340
Name
puuD
Replicon chromosome
Genomic location 2608167 - 2608922 (- strand)

Cross-References

RefSeq YP_259447.1
GI 70729708
EC Number 3.5.1.94
Entrez 3477978
INSDC AAY91613.1
NCBI Locus Tag PFL_2340
UniParc UPI000054D445
UniProtKB Acc Q4KE86
UniProtKB ID Q4KE86_PSEF5
UniRef100 UniRef100_Q4KE86
UniRef50 UniRef50_C9Y790
UniRef90 UniRef90_Q4KE86

Product

Feature Type CDS
Coding Frame 1
Product Name
gamma-glutamyl-gamma-aminobutyrate hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -6.45
Kyte-Doolittle Hydrophobicity Value -0.024
Molecular Weight (kDa) 27.1
Isoelectric Point (pI) 5.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 331 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000294 (491 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2340
Search term: puuD

Human Homologs

References

No references are associated with this feature.