Pseudomonas protegens Pf-5, PFL_2365

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2365
Name
Replicon chromosome
Genomic location 2637968 - 2640802 (+ strand)

Cross-References

RefSeq YP_259472.1
GI 70729733
Entrez 3478941
INSDC AAY91638.1
NCBI Locus Tag PFL_2365
UniParc UPI000054D45E
UniProtKB Acc Q4KE61
UniProtKB ID Q4KE61_PSEF5
UniRef100 UniRef100_Q4KE61
UniRef50 UniRef50_Q9HUR6
UniRef90 UniRef90_Q4KE61

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent outermembrane heme receptor
Synonyms
Evidence for Translation
Charge (pH 7) -5.66
Kyte-Doolittle Hydrophobicity Value -0.509
Molecular Weight (kDa) 103556.1
Isoelectric Point (pI) 6.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 126 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004521 (333 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2365

Human Homologs

References

No references are associated with this feature.