Pseudomonas protegens Pf-5, PFL_2441

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2441
Name
Replicon chromosome
Genomic location 2704553 - 2705536 (+ strand)

Cross-References

RefSeq YP_259548.1
GI 70729809
Entrez 3477065
INSDC AAY91714.1
NCBI Locus Tag PFL_2441
UniParc UPI000054D4AA
UniProtKB Acc Q4KDY5
UniProtKB ID Q4KDY5_PSEF5
UniRef100 UniRef100_Q4KDY5
UniRef50 UniRef50_P26646
UniRef90 UniRef90_Q4KDY5

Product

Feature Type CDS
Coding Frame 1
Product Name
YhdH/YhfP family quinone oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7) -2.44
Kyte-Doolittle Hydrophobicity Value 0.038
Molecular Weight (kDa) 34.9
Isoelectric Point (pI) 6.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 429 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003566 (441 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2441

Human Homologs

Ensembl 110, assembly GRCh38.p14
reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]
E-value: 1.2e-06
Percent Identity: 28.2

References

No references are associated with this feature.