Pseudomonas protegens Pf-5, PFL_2614

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_2614
Name
Replicon	chromosome
Genomic location	2891274 - 2891837 (+ strand)

Cross-References

RefSeq	YP_259721.1
GI	70729981
Entrez	3476522
INSDC	AAY91886.1
NCBI Locus Tag	PFL_2614
UniParc	UPI000054D555
UniProtKB Acc	Q4KDG2
UniProtKB ID	Q4KDG2_PSEF5
UniRef100	UniRef100_Q4KDG2
UniRef50	UniRef50_Q9I3Y5
UniRef90	UniRef90_Q4KDG2

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA-binding domain/cupin domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-4.89
Kyte-Doolittle Hydrophobicity Value	-0.244
Molecular Weight (kDa)	20.9
Isoelectric Point (pI)	5.34

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 281 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000594 (1255 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_2614 Search term: DNA-binding domain/cupin domain-containing protein

Human Homologs

References