Pseudomonas protegens Pf-5, PFL_2710

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2710
Name
Replicon chromosome
Genomic location 2988206 - 2989609 (+ strand)

Cross-References

RefSeq YP_259817.1
GI 70730078
Entrez 3477159
INSDC AAY91983.1
NCBI Locus Tag PFL_2710
UniParc UPI000054D5B5
UniProtKB Acc Q4KD66
UniProtKB ID Q4KD66_PSEF5
UniRef100 UniRef100_Q4KD66
UniRef50 UniRef50_P39137
UniRef90 UniRef90_Q4KD66

Product

Feature Type CDS
Coding Frame 1
Product Name
AAT family amino acid transporter
Synonyms
Evidence for Translation
Charge (pH 7) 9.52
Kyte-Doolittle Hydrophobicity Value 0.755
Molecular Weight (kDa) 50948.2
Isoelectric Point (pI) 9.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 389 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000219 (3043 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2710

Human Homologs

References

No references are associated with this feature.