Pseudomonas protegens Pf-5, PFL_2949

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_2949
Name
Replicon	chromosome
Genomic location	3302232 - 3303179 (+ strand)

Cross-References

RefSeq	YP_260055.1
GI	70730316
Entrez	3477317
INSDC	AAY92221.1
NCBI Locus Tag	PFL_2949
UniParc	UPI000054D690
UniProtKB Acc	Q4KCH8
UniProtKB ID	Q4KCH8_PSEF5
UniRef100	UniRef100_Q4KCH8
UniRef50	UniRef50_W6RK53
UniRef90	UniRef90_Q4KCH8

Product

Feature Type	CDS
Coding Frame	1
Product Name	alpha/beta hydrolase
Synonyms
Evidence for Translation
Charge (pH 7)	-2.03
Kyte-Doolittle Hydrophobicity Value	-0.173
Molecular Weight (kDa)	35402.2
Isoelectric Point (pI)	6.70

Subcellular localization

Individual Mappings	Localization Confidence PMID Extracellular Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 363 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG020322 (48 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_2949 Search term: alpha/beta hydrolase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000369843 epoxide hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:3402] E-value: 9.8e-54 Percent Identity: 37.7
Ensembl 110, assembly GRCh38.p14	ENSP00000430269 epoxide hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:3402] E-value: 9.8e-54 Percent Identity: 37.7
Ensembl 110, assembly GRCh38.p14	ENSP00000428875 epoxide hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:3402] E-value: 9.8e-54 Percent Identity: 37.7
Ensembl 110, assembly GRCh38.p14	ENSP00000430302 epoxide hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:3402] E-value: 9.8e-54 Percent Identity: 37.7

References