Pseudomonas protegens Pf-5, PFL_2983 (fitD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2983
Name
fitD
Replicon chromosome
Genomic location 3350746 - 3359757 (+ strand)

Cross-References

RefSeq YP_260089.1
GI 70730350
Entrez 3476073
INSDC AAY92255.1
NCBI Locus Tag PFL_2983
UniParc UPI000054D6B2
UniProtKB Acc Q4KCE4
UniProtKB ID Q4KCE4_PSEF5
UniRef100 UniRef100_Q4KCE4
UniRef50 UniRef50_Q4KCE4
UniRef90 UniRef90_Q4KCE4

Product

Feature Type CDS
Coding Frame 1
Product Name
cytotoxin FitD
Synonyms
Evidence for Translation
Charge (pH 7) -23.76
Kyte-Doolittle Hydrophobicity Value -0.295
Molecular Weight (kDa) 327079.0
Isoelectric Point (pI) 6.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 8 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020333 (44 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2983
Search term: fitD
Search term: cytotoxin FitD

Human Homologs

References

No references are associated with this feature.