Pseudomonas protegens Pf-5, PFL_3050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3050
Name
Replicon chromosome
Genomic location 3516390 - 3517754 (+ strand)

Cross-References

RefSeq YP_260156.1
GI 70730415
EC Number 1.1.1.22
Entrez 3475943
INSDC AAY92320.1
NCBI Locus Tag PFL_3050
UniParc UPI000054D6F1
UniProtKB Acc Q4KC77
UniProtKB ID Q4KC77_PSEF5
UniRef100 UniRef100_Q4KC77
UniRef50 UniRef50_T1NI76
UniRef90 UniRef90_Q4KC77

Product

Feature Type CDS
Coding Frame 1
Product Name
UDP-glucose 6-dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -6.85
Kyte-Doolittle Hydrophobicity Value -0.189
Molecular Weight (kDa) 50.6
Isoelectric Point (pI) 6.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 588 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002107 (812 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3050

Human Homologs

Ensembl 110, assembly GRCh38.p14
UDP-glucose 6-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:12525]
E-value: 1.6e-57
Percent Identity: 33.1
Ensembl 110, assembly GRCh38.p14
UDP-glucose 6-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:12525]
E-value: 1.6e-57
Percent Identity: 33.1

References

No references are associated with this feature.