Pseudomonas protegens Pf-5, PFL_3210 (aprA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3210
Name
aprA
Replicon chromosome
Genomic location 3701507 - 3702955 (- strand)

Cross-References

RefSeq YP_260315.1
GI 70730574
EC Number 3.4.24.-
Entrez 3478123
INSDC AAY92479.1
NCBI Locus Tag PFL_3210
UniParc UPI000054D790
UniProtKB Acc Q4KBR8
UniProtKB ID Q4KBR8_PSEF5
UniRef100 UniRef100_Q4KBR8
UniRef50 UniRef50_Q03023
UniRef90 UniRef90_Q4KBR8

Product

Feature Type CDS
Coding Frame 1
Product Name
extracellular alkaline metalloprotease AprA
Synonyms
Evidence for Translation
Charge (pH 7) -19.08
Kyte-Doolittle Hydrophobicity Value -0.239
Molecular Weight (kDa) 49.8
Isoelectric Point (pI) 4.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 122 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020434 (24 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3210
Search term: aprA

Human Homologs

References

No references are associated with this feature.