Pseudomonas protegens Pf-5, PFL_3243 (yneE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3243
Name
yneE
Replicon chromosome
Genomic location 3743359 - 3744258 (+ strand)

Cross-References

RefSeq YP_260348.1
GI 70730607
Entrez 3477863
INSDC AAY92512.1
NCBI Locus Tag PFL_3243
UniParc UPI000054D7B1
UniProtKB Acc Q4KBN5
UniProtKB ID Q4KBN5_PSEF5
UniRef100 UniRef100_Q4KBN5
UniRef50 UniRef50_Q4KBN5
UniRef90 UniRef90_Q4KBN5

Product

Feature Type CDS
Coding Frame 1
Product Name
swarming motility protein YneE
Synonyms
Evidence for Translation
Charge (pH 7) -5.01
Kyte-Doolittle Hydrophobicity Value 0.170
Molecular Weight (kDa) 33.7
Isoelectric Point (pI) 5.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 144 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016823 (137 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3243
Search term: yneE

Human Homologs

References

No references are associated with this feature.