Pseudomonas protegens Pf-5, PFL_3367 (alkJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3367
Name
alkJ
Replicon chromosome
Genomic location 3888317 - 3889978 (+ strand)

Cross-References

RefSeq YP_260472.1
GI 70730731
EC Number 1.1.99.-
Entrez 3476143
INSDC AAY92636.1
NCBI Locus Tag PFL_3367
UniParc UPI000054D82D
UniProtKB Acc Q4KBB1
UniProtKB ID Q4KBB1_PSEF5
UniRef100 UniRef100_Q4KBB1
UniRef50 UniRef50_Q4KBB1
UniRef90 UniRef90_Q4KBB1

Product

Feature Type CDS
Coding Frame 1
Product Name
alcohol dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) 5.09
Kyte-Doolittle Hydrophobicity Value -0.209
Molecular Weight (kDa) 60239.1
Isoelectric Point (pI) 7.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 216 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001590 (827 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3367
Search term: alkJ

Human Homologs

Ensembl 110, assembly GRCh38.p14
choline dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24288]
E-value: 1.6e-107
Percent Identity: 40.3

References

No references are associated with this feature.