Pseudomonas protegens Pf-5, PFL_3379

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_3379
Name
Replicon	chromosome
Genomic location	3900696 - 3901817 (- strand)

Cross-References

RefSeq	YP_260484.1
GI	70730743
Entrez	3476272
INSDC	AAY92648.1
NCBI Locus Tag	PFL_3379
UniParc	UPI000054D839
UniProtKB Acc	Q4KB99
UniProtKB ID	Q4KB99_PSEF5
UniRef100	UniRef100_Q4KB99
UniRef50	UniRef50_S3MZ62
UniRef90	UniRef90_Q4KB99

Product

Feature Type	CDS
Coding Frame	1
Product Name	sugar diacid recognition domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.25
Kyte-Doolittle Hydrophobicity Value	-0.292
Molecular Weight (kDa)	41.7
Isoelectric Point (pI)	6.32

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 116 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001012 (496 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_3379 Search term: sugar diacid recognition domain-containing protein

Human Homologs

References