Pseudomonas protegens Pf-5, PFL_3411

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3411
Name
Replicon chromosome
Genomic location 3929759 - 3930823 (+ strand)

Cross-References

RefSeq YP_260516.1
GI 70730775
Entrez 3476304
INSDC AAY92680.1
NCBI Locus Tag PFL_3411
UniParc UPI000054D859
UniProtKB Acc Q4KB67
UniProtKB ID Q4KB67_PSEF5
UniRef100 UniRef100_Q4KB67
UniRef50 UniRef50_C7CA32
UniRef90 UniRef90_Q4KB67

Product

Feature Type CDS
Coding Frame 1
Product Name
2-nitropropane dioxygenase
Synonyms
Evidence for Translation
Charge (pH 7) -3.19
Kyte-Doolittle Hydrophobicity Value 0.059
Molecular Weight (kDa) 37826.0
Isoelectric Point (pI) 6.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 350 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000986 (379 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3411

Human Homologs

References

No references are associated with this feature.