Pseudomonas protegens Pf-5, PFL_3429

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3429
Name
Replicon chromosome
Genomic location 3946799 - 3947407 (- strand)

Cross-References

RefSeq YP_260533.1
GI 70730792
Entrez 3477658
INSDC AAY92697.1
NCBI Locus Tag PFL_3429
UniParc UPI000054D86A
UniProtKB Acc Q4KB50
UniProtKB ID Q4KB50_PSEF5
UniRef100 UniRef100_Q4KB50
UniRef50 UniRef50_G8Q0W8
UniRef90 UniRef90_Q4KB50

Product

Feature Type CDS
Coding Frame 1
Product Name
NAD(P)H quinone oxidoreductase, quinone family
Synonyms
Evidence for Translation
Charge (pH 7) -3.63
Kyte-Doolittle Hydrophobicity Value -0.030
Molecular Weight (kDa) 22416.2
Isoelectric Point (pI) 6.34

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 241 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000820 (1495 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3429

Human Homologs

Ensembl 110, assembly GRCh38.p14
N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
E-value: 5.2e-16
Percent Identity: 30.7
Ensembl 110, assembly GRCh38.p14
N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
E-value: 5.2e-16
Percent Identity: 30.7
Ensembl 110, assembly GRCh38.p14
N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
E-value: 5.2e-16
Percent Identity: 30.7

References

No references are associated with this feature.