Pseudomonas protegens Pf-5, PFL_3446

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3446
Name
Replicon chromosome
Genomic location 3958533 - 3958928 (+ strand)

Cross-References

RefSeq YP_260550.1
GI 70730809
Entrez 3477675
INSDC AAY92714.1
NCBI Locus Tag PFL_3446
UniParc UPI000054D87B
UniProtKB Acc Q4KB33
UniProtKB ID Q4KB33_PSEF5
UniRef100 UniRef100_Q4KB33
UniRef50 UniRef50_Q4KB33
UniRef90 UniRef90_Q4KB33

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 4.37
Kyte-Doolittle Hydrophobicity Value -0.237
Molecular Weight (kDa) 14.4
Isoelectric Point (pI) 9.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020492 (15 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3446
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.