Pseudomonas protegens Pf-5, PFL_3505

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3505
Name
Replicon chromosome
Genomic location 4039140 - 4039739 (- strand)

Cross-References

RefSeq YP_260608.1
GI 70730867
Entrez 3475539
INSDC AAY92772.1
NCBI Locus Tag PFL_3505
UniParc UPI000054D8B5
UniProtKB Acc Q4KAX5
UniProtKB ID Q4KAX5_PSEF5
UniRef100 UniRef100_Q4KAX5
UniRef50 UniRef50_Q4KAX5
UniRef90 UniRef90_Q4KAX5

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -3.13
Kyte-Doolittle Hydrophobicity Value -0.120
Molecular Weight (kDa) 21.7
Isoelectric Point (pI) 5.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 230 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020514 (27 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3505

Human Homologs

References

No references are associated with this feature.