Pseudomonas protegens Pf-5, PFL_3539 (lys1_2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3539
Name
lys1_2
Replicon chromosome
Genomic location 4081920 - 4083164 (+ strand)

Cross-References

RefSeq YP_260642.1
GI 70730901
EC Number 1.5.1.7
Entrez 3475358
INSDC AAY92806.1
NCBI Locus Tag PFL_3539
UniParc UPI000054D8D7
UniProtKB Acc Q4KAU1
UniProtKB ID Q4KAU1_PSEF5
UniRef100 UniRef100_Q4KAU1
UniRef50 UniRef50_Q4KAU1
UniRef90 UniRef90_Q4KAU1

Product

Feature Type CDS
Coding Frame 1
Product Name
saccharopine dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -10.76
Kyte-Doolittle Hydrophobicity Value -0.184
Molecular Weight (kDa) 45.5
Isoelectric Point (pI) 5.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 154 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015982 (148 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3539
Search term: lys1_2

Human Homologs

References

No references are associated with this feature.