Pseudomonas protegens Pf-5, PFL_3816

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3816
Name
Replicon chromosome
Genomic location 4415739 - 4416050 (- strand)

Cross-References

RefSeq YP_260916.1
GI 70731175
Entrez 3476218
INSDC AAY93080.1
NCBI Locus Tag PFL_3816
UniParc UPI000054D9E7
UniProtKB Acc Q4KA17
UniProtKB ID Q4KA17_PSEF5
UniRef100 UniRef100_Q4KA17
UniRef50 UniRef50_Q4KA17
UniRef90 UniRef90_Q4KA17

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.84
Kyte-Doolittle Hydrophobicity Value -0.024
Molecular Weight (kDa) 11.4
Isoelectric Point (pI) 6.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 9 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020651 (9 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3816

Human Homologs

References

No references are associated with this feature.