Pseudomonas protegens Pf-5, PFL_3824

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3824
Name
Replicon chromosome
Genomic location 4421505 - 4423832 (+ strand)

Cross-References

RefSeq YP_260924.1
GI 70731183
Entrez 3476226
INSDC AAY93088.1
NCBI Locus Tag PFL_3824
UniParc UPI000054D9EF
UniProtKB Acc Q4KA09
UniProtKB ID Q4KA09_PSEF5
UniRef100 UniRef100_Q4KA09
UniRef50 UniRef50_A4Y015
UniRef90 UniRef90_Q4KA09

Product

Feature Type CDS
Coding Frame 1
Product Name
sensory box histidine kinase/response regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.27
Kyte-Doolittle Hydrophobicity Value 0.063
Molecular Weight (kDa) 84434.5
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 620 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017774 (123 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3824

Human Homologs

References

No references are associated with this feature.