Pseudomonas protegens Pf-5, PFL_3829

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3829
Name
Replicon chromosome
Genomic location 4427678 - 4428298 (+ strand)

Cross-References

RefSeq YP_260929.2
GI 346643083
Entrez 3476231
INSDC AAY93093.2
NCBI Locus Tag PFL_3829
UniParc UPI00021A0050
UniProtKB Acc Q4KA04
UniProtKB ID Q4KA04_PSEF5
UniRef100 UniRef100_Q4KA04
UniRef50 UniRef50_H8MZH2
UniRef90 UniRef90_Q4KA04

Product

Feature Type CDS
Coding Frame 1
Product Name
LysE family translocator protein
Synonyms
Evidence for Translation
Charge (pH 7) 9.40
Kyte-Doolittle Hydrophobicity Value 0.723
Molecular Weight (kDa) 22.2
Isoelectric Point (pI) 11.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 295 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003750 (736 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3829

Human Homologs

References

No references are associated with this feature.