Pseudomonas protegens Pf-5, PFL_3858 (xylX)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3858
Name
xylX
Replicon chromosome
Genomic location 4459123 - 4460487 (- strand)

Cross-References

RefSeq YP_260958.1
GI 70731217
EC Number 1.14.12.11
Entrez 3476260
INSDC AAY93122.1
NCBI Locus Tag PFL_3858
UniParc UPI000054DA11
UniProtKB Acc Q4K9X5
UniProtKB ID Q4K9X5_PSEF5
UniRef100 UniRef100_Q4K9X5
UniRef50 UniRef50_Q51601
UniRef90 UniRef90_Q4K9X5

Product

Feature Type CDS
Coding Frame 1
Product Name
toluate 1,2-dioxygenase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7) -12.10
Kyte-Doolittle Hydrophobicity Value -0.601
Molecular Weight (kDa) 51.9
Isoelectric Point (pI) 5.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 190 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003046 (1308 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3858
Search term: xylX

Human Homologs

References

No references are associated with this feature.