Pseudomonas protegens Pf-5, PFL_3860 (catA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3860
Name
catA
Replicon chromosome
Genomic location 4461802 - 4462731 (- strand)

Cross-References

RefSeq YP_260960.1
GI 70731219
EC Number 1.13.11.1
Entrez 3476262
INSDC AAY93124.1
NCBI Locus Tag PFL_3860
UniParc UPI000054DA13
UniProtKB Acc Q4K9X3
UniProtKB ID Q4K9X3_PSEF5
UniRef100 UniRef100_Q4K9X3
UniRef50 UniRef50_P07773
UniRef90 UniRef90_Q4K9X3

Product

Feature Type CDS
Coding Frame 1
Product Name
catechol 1,2-dioxygenase
Synonyms
Evidence for Translation
Charge (pH 7) -15.61
Kyte-Doolittle Hydrophobicity Value -0.436
Molecular Weight (kDa) 34.2
Isoelectric Point (pI) 4.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 130 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003053 (467 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3860
Search term: catA

Human Homologs

References

No references are associated with this feature.