Pseudomonas protegens Pf-5, PFL_3864

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3864
Name
Replicon chromosome
Genomic location 4465339 - 4466091 (- strand)

Cross-References

RefSeq YP_260964.1
GI 70731223
Entrez 3476266
INSDC AAY93128.1
NCBI Locus Tag PFL_3864
UniParc UPI000054DA17
UniProtKB Acc Q4K9W9
UniProtKB ID Q4K9W9_PSEF5
UniRef100 UniRef100_Q4K9W9
UniRef50 UniRef50_Q4K9W9
UniRef90 UniRef90_Q4K9W9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.04
Kyte-Doolittle Hydrophobicity Value -0.409
Molecular Weight (kDa) 27.3
Isoelectric Point (pI) 5.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015465 (63 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3864

Human Homologs

References

No references are associated with this feature.